Protein family
Protein sequence
Protein function
Catalytic activity
EC number
EC number description
4.2.1.2
Lyases;
Carbon-oxygen lyases;
Hydro-lyases;
fumarate hydratase
PDB | Resolution (Å) | PDB name |
---|---|---|
3E04 | 1.95 | Crystal structure of human fumarate hydratase |
5D6B | 2.1 | Human fumarase (wild type) |
5UPP | 1.8 | Crystal structure of human fumarate hydratase |
6EBT | 2.3 | Crystal structure of recombinant mutant N107T of human fumarase |
6V8F | 2.3 | Crystal structure of recombinat mutant Q185R of human fumarase |
6VBE | 1.899 | Crystal structure of recombinant mutant H180R of human fumarase |
7LUB | 2.15 | Crystal structure of recombinant human fumarase in complex with D-2-amino-3-phosphono-propionic acid |
GO ontology | GO term | GO description |
---|---|---|
Biological Process | GO:0006974 | DNA damage response |
Biological Process | GO:0006281 | DNA repair |
Biological Process | GO:0006106 | fumarate metabolic process |
Biological Process | GO:0048873 | homeostasis of number of cells within a tissue |
Biological Process | GO:0006108 | malate metabolic process |
Biological Process | GO:0120162 | positive regulation of cold-induced thermogenesis |
Biological Process | GO:2001034 | positive regulation of double-strand break repair via nonhomologous end joining |
Biological Process | GO:0000821 | regulation of arginine metabolic process |
Biological Process | GO:0006099 | tricarboxylic acid cycle |
Biological Process | GO:0000050 | urea cycle |
Molecular Function | GO:0004333 | fumarate hydratase activity |
Molecular Function | GO:0042393 | histone binding |
Cellular Component | GO:0005694 | chromosome |
Cellular Component | GO:0005737 | cytoplasm |
Cellular Component | GO:0005829 | cytosol |
Cellular Component | GO:0070062 | extracellular exosome |
Cellular Component | GO:0005759 | mitochondrial matrix |
Cellular Component | GO:0005739 | mitochondrion |
Cellular Component | GO:0005634 | nucleus |
Cellular Component | GO:0035861 | site of double-strand break |
Cellular Component | GO:0045239 | tricarboxylic acid cycle enzyme complex |
InterPro | InterPro name |
---|---|
IPR000362 | Fumarate lyase family |
IPR005677 | Fumarate hydratase, class II |
IPR008948 | L-Aspartase-like |
IPR018951 | Fumarase C, C-terminal |
IPR020557 | Fumarate lyase, conserved site |
IPR022761 | Fumarate lyase, N-terminal |
IPR024083 | Fumarase/histidase, N-terminal |
Pfam | Pfam name |
---|---|
PF00206 | Lyase |
PF10415 | Fumarase C C-terminus |
Reactome | Reactome Name | Node type | Reactome Root | Reactome Root Name |
---|---|---|---|---|
R-HSA-71403 | Citric acid cycle (TCA cycle) | Leaf | R-HSA-1430728 | Metabolism |
Location | ECO term | Pubmed |
---|---|---|
Chromosome | ECO:0000269 | PubMed:26237645 |
Cytoplasm, cytosol | ECO:0000269 | PubMed:20231875 |
Cytoplasm, cytosol | ECO:0000269 | PubMed:22509282 |
Cytoplasm, cytosol | ECO:0000269 | PubMed:26237645 |
Cytoplasm, cytosol | ECO:0000269 | PubMed:27037871 |
Mitochondrion | ECO:0000269 | PubMed:27037871 |
Nucleus | ECO:0000269 | PubMed:20231875 |
Nucleus | ECO:0000269 | PubMed:26237645 |
HPO ID | HPO name |
---|---|
HP:0000006 | Autosomal dominant inheritance |
HP:0000007 | Autosomal recessive inheritance |
HP:0000093 | Proteinuria |
HP:0000096 | Glomerular sclerosis |
HP:0000131 | Uterine leiomyoma |
HP:0000218 | High palate |
HP:0000252 | Microcephaly |
HP:0000316 | Hypertelorism |
HP:0000405 | Conductive hearing impairment |
HP:0000463 | Anteverted nares |
HP:0000505 | Visual impairment |
HP:0000518 | Cataract |
HP:0000526 | Aniridia |
HP:0000648 | Optic atrophy |
HP:0000740 | Episodic paroxysmal anxiety |
HP:0000790 | Hematuria |
HP:0000980 | Pallor |
HP:0000989 | Pruritus |
HP:0001069 | Episodic hyperhidrosis |
HP:0001095 | Hypertensive retinopathy |
HP:0001252 | Hypotonia |
HP:0001263 | Global developmental delay |
HP:0001274 | Agenesis of corpus callosum |
HP:0001290 | Generalized hypotonia |
HP:0001293 | Cranial nerve compression |
HP:0001337 | Tremor |
HP:0001339 | Lissencephaly |
HP:0001342 | Cerebral hemorrhage |
HP:0001399 | Hepatic failure |
HP:0001406 | Intrahepatic cholestasis |
HP:0001508 | Failure to thrive |
HP:0001541 | Ascites |
HP:0001561 | Polyhydramnios |
HP:0001605 | Vocal cord paralysis |
HP:0001618 | Dysphonia |
HP:0001635 | Congestive heart failure |
HP:0001824 | Weight loss |
HP:0001901 | Polycythemia |
HP:0001942 | Metabolic acidosis |
HP:0001962 | Palpitations |
HP:0002007 | Frontal bossing |
HP:0002018 | Nausea |
HP:0002059 | Cerebral atrophy |
HP:0002119 | Ventriculomegaly |
HP:0002126 | Polymicrogyria |
HP:0002133 | Status epilepticus |
HP:0002167 | Abnormality of speech or vocalization |
HP:0002187 | Intellectual disability, profound |
HP:0002190 | Choroid plexus cyst |
HP:0002331 | Recurrent paroxysmal headache |
HP:0002365 | Hypoplasia of the brainstem |
HP:0002574 | Episodic abdominal pain |
HP:0002640 | Hypertension associated with pheochromocytoma |
HP:0002668 | Paraganglioma |
HP:0002864 | Paraganglioma of head and neck |
HP:0002891 | Uterine leiomyosarcoma |
HP:0002904 | Hyperbilirubinemia |
HP:0003011 | Abnormality of the musculature |
HP:0003072 | Hypercalcemia |
HP:0003128 | Lactic acidosis |
HP:0003345 | Elevated urinary norepinephrine |
HP:0003355 | Aminoaciduria |
HP:0003528 | Elevated calcitonin |
HP:0003536 | Decreased fumarate hydratase activity |
HP:0003574 | Positive regitine blocking test |
HP:0003639 | Elevated urinary epinephrine |
HP:0003758 | Reduced subcutaneous adipose tissue |
HP:0003829 | Typified by incomplete penetrance |
HP:0004482 | Relative macrocephaly |
HP:0005280 | Depressed nasal bridge |
HP:0005584 | Renal cell carcinoma |
HP:0006732 | Papillary renal cell carcinoma type 2 |
HP:0006737 | Extraadrenal pheochromocytoma |
HP:0006748 | Adrenal pheochromocytoma |
HP:0006755 | Cutaneous leiomyosarcoma |
HP:0007437 | Multiple cutaneous leiomyomas |
HP:0007620 | Cutaneous leiomyoma |
HP:0008629 | Pulsatile tinnitus |
HP:0009711 | Retinal capillary hemangioma |
HP:0010532 | Paroxysmal vertigo |
HP:0011129 | Bilateral fetal pyelectasis |
HP:0011682 | Perimembranous ventricular septal defect |
HP:0011703 | Sinus tachycardia |
HP:0011979 | Elevated urinary dopamine |
HP:0012222 | Arachnoid hemangiomatosis |
HP:0012378 | Fatigue |
HP:0025269 | Panic attack |
HP:0030774 | Mitochondrial swelling |
HP:0031284 | Flushing |
HP:0032106 | Conjunctival icterus |
HP:0033092 | Increased urine succinate level |
HP:0033165 | Necrotizing enterocolitis |
HP:0034198 | Second trimester onset |
HP:0034648 | Elevated urine fumaric acid level |
HP:0100580 | Barrett esophagus |
HP:0100650 | Vaginal neoplasm |
HP:0100749 | Chest pain |
HP:0100751 | Esophageal neoplasm |
HP:0100954 | Open operculum |
Disease name | MONDO ID | ICD10 | ICD10 chapter | OMIM | Orphanet |
---|---|---|---|---|---|
hereditary leiomyomatosis and renal cell cancer | MONDO:0007888 | C64 | chapter2, Neoplasms | OMIM:150800 | Orphanet:523 |
fumaric aciduria | MONDO:0011730 | E88 | chapter4, Endocrine, nutritional and metabolic diseases | OMIM:606812 | Orphanet:24 |
hereditary pheochromocytoma-paraganglioma | MONDO:0017366 | C74 | chapter2, Neoplasms | Orphanet:29072 | |
hereditary pheochromocytoma-paraganglioma | MONDO:0017366 | C75 | chapter2, Neoplasms | Orphanet:29072 | |
hereditary pheochromocytoma-paraganglioma | MONDO:0017366 | D35 | chapter2, Neoplasms | Orphanet:29072 |